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NanoString Reveals Novel Sequencing Method for Cancer Assays

By Aaron Krol

February 29, 2016 | NanoString Technologies, a Seattle company with a small but comfortable niche in automated genetic analysis, is preparing to make the leap into DNA and RNA sequencing. The company revealed its novel sequencing process in a poster at the Advances in Genome Biology and Technology meeting, held in Orlando, Fla. earlier this month.

NanoString’s proposed sequencer is closely related to its current line of nCounter instruments, which target short genetic sequences with optically barcoded hybridization probes. In an nCounter experiment, a set of probes designed to bind with a specific group of genetic elements―for example, segments of genes that are commonly overexpressed in cancer―is mixed with a DNA or RNA sample. Each probe carries a unique sequence of fluorescent tags, the optical barcodes that are imaged to learn which genetic targets are present in the sample, and in what numbers.

The new sequencing process, named Hyb and Seq, uses very similar probes. But instead of just spotting key genes and variants, a Hyb and Seq experiment can read huge volumes of barcodes to recover the complete sequence of a DNA molecule.

Read the full story at Bio-IT World.